Contains over 232,000 molecular interaction and reaction networks
for metabolism, various cellular processes, and human diseases.
InnateDB currently contains 283 human and 279 mouse pathways from KEGG (December 7, 2014).
NetPath is a curated resource of 29 signal
transduction pathways in humans. It is a
collaboration between the Pandey Lab at Johns
Hopkins University and the Institute of Bioinformatics, India.
InnateDB currently contains 29 human pathways from NetPath (December 7, 2014).
INOH is a pathway database providing 857 pathways from model
organisms including human, mouse, rat and others. In INOH, the term pathway refers to higher
order functional knowledge such as relationships among multiple bio-molecules that constitute
signal transduction pathways or biological events in general.
The Reactome project is a collaboration among
Cold Spring Harbor Laboratory, The European
Bioinformatics Institute, and The Gene Ontology
Consortium to develop a curated resource of core
pathways and reactions in human biology. Reactome provides data for over 18,000 pathways.
InnateDB currently contains 1,544 human and 1,462 mouse pathways from Reactome (December 7, 2014).
The Pathway Interaction Database is a highly structured, curated collection of information
about known biomolecular interactions and key cellular processes assembled into over 450 signaling
pathways. It is a collaborative project between the US National Cancer Institute (NCI) and Nature
Publishing Group (NPG). Please note that as of September 23, 2012 the PID is no longer being actively curated; it will be retired in September 2013.
InnateDB currently contains 450 human pathway events from 450 signaling pathways from PID (December 7, 2014).